commit 7976f1a1c59be07b82d28d66cc1389337e23da09
Author: RobViren <robviren@gmail.com>
Date:   Fri Nov 12 13:12:40 2021 -0600

    Init

diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..0a858f9
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+*.tsv
\ No newline at end of file
diff --git a/data/curl.mp4 b/data/curl.mp4
new file mode 100644
index 0000000..7aec890
Binary files /dev/null and b/data/curl.mp4 differ
diff --git a/data/press.mp4 b/data/press.mp4
new file mode 100644
index 0000000..33cc20c
Binary files /dev/null and b/data/press.mp4 differ
diff --git a/data/situp.mp4 b/data/situp.mp4
new file mode 100644
index 0000000..2f88177
Binary files /dev/null and b/data/situp.mp4 differ
diff --git a/main.py b/main.py
new file mode 100644
index 0000000..96ee7b8
--- /dev/null
+++ b/main.py
@@ -0,0 +1,110 @@
+import numpy as np
+import cv2
+import datetime
+import matplotlib.pyplot as plt
+import matplotlib
+
+matplotlib.use('WebAgg')
+scale = 2
+max_count = 1088*1920*255
+
+def processVideo(path):
+    prev_gray = None
+    data = []
+    cap = cv2.VideoCapture(path)
+    alpha = 0.90
+    posx = 0.0
+    posy = 0.0
+    posxs = []
+    posys = []
+    counts = []
+    while True:
+        ret, src = cap.read()
+        if not ret:
+            print(ret)
+            break
+        else:
+            smol = cv2.resize(
+                src, (int(src.shape[1]/scale), int(src.shape[0]/scale)))
+            gray = cv2.cvtColor(smol, cv2.COLOR_BGR2GRAY)
+
+            if prev_gray is not None:
+                diff = cv2.absdiff(gray, prev_gray)
+                blur = cv2.GaussianBlur(diff, (5,5),0)
+                retval, thresh = cv2.threshold(blur, 50, 255, cv2.THRESH_TOZERO)
+                cv2.imshow("thresh", thresh)
+                count = np.sum(thresh)/max_count * 100.0
+                if count > 0.001 and count < 0.1:
+                    moments = cv2.moments(thresh)
+                    cX = int(moments["m10"] / moments["m00"])
+                    cY = int(moments["m01"] / moments["m00"])
+                    posx = posx * alpha + cX * (1.0-alpha)
+                    posy = posy * alpha + cY * (1.0-alpha)
+                    posxs.append(posx)
+                    posys.append(posy)
+                    counts.append(count)
+                  
+                cv2.putText(smol, "{:.2}".format(count), (20, 50),
+                            cv2.FONT_HERSHEY_COMPLEX, 1, (255, 0, 0), 2)
+                i = 0
+                while i < len(posxs):
+                    blue_color = 0
+                    if counts[i] > 0.01:
+                        blue_color = 255
+                    else:
+                        blue_color = counts[i]/0.01 * 255
+                        
+                    cv2.circle(smol, (int(posxs[i]), int(posys[i])), 10, (blue_color,0,0),6)
+                    i+= 1
+
+                
+
+                if count > 0.1:
+                    count = 0.1
+                data.append(count)
+
+            cv2.imshow("src", smol)
+            prev_gray = np.copy(gray)
+
+        key = cv2.waitKey(10)
+        if key == 27:
+            break
+    cap.release()
+    cv2.destroyAllWindows()
+    return data
+
+
+out = open("data.tsv", "w+")
+data1 = processVideo("data/curl.mp4")
+data2 = processVideo("data/press.mp4")
+data3 = processVideo("data/situp.mp4")
+
+i = 0
+max_length = 0
+if len(data1) > max_length:
+    max_length = len(data1)
+if len(data2) > max_length:
+    max_length = len(data2)
+if len(data3) > max_length:
+    max_length = len(data3)
+
+while i < max_length:
+    d1 = 0
+    try:
+        d1 = data1[i]
+    except:
+        print("")
+    d2 = 0
+    try:
+        d2 = data2[i]
+    except:
+        print("")
+    d3 = 0
+    try:
+        d3 = data3[i]
+    except:
+        print("")
+    out.write("{}\t{}\t{}\n".format(d1, d2, d3))
+    i += 1
+
+out.close()
diff --git a/plot.py b/plot.py
new file mode 100644
index 0000000..4c713b0
--- /dev/null
+++ b/plot.py
@@ -0,0 +1,33 @@
+import matplotlib.pyplot as plt
+import matplotlib
+import pandas as pd
+import numpy as np
+from scipy.signal import savgol_filter
+import scipy.signal as signal
+import sys
+df = pd.read_csv(sys.argv[1],delimiter="\t")
+target = sys.argv[2]
+time_size = 5
+window = time_size * 30 + 1
+
+def reject_outliers(data,indicies, m = 2.):
+    d = np.abs(data - np.median(data))
+    mdev = np.median(d)
+    s = d/mdev if mdev else 0.
+    return (data[s<m],indicies[s<m])
+
+xhat = savgol_filter(df[target].array.to_numpy(),window,3)
+indexs = np.arange(len(xhat))
+xhat,xs = reject_outliers(xhat,indexs,m=1.5)
+indicies = signal.argrelextrema(xhat, np.less,order=int(window/2))[0]
+
+plt.plot(df[target])
+plt.plot(xs,xhat,color="green")
+plt.plot(xs[indicies],xhat[indicies],marker="o", ls="", ms=3 )
+
+value1 = np.median(xhat)
+print(np.median(xhat))
+# value2 = np.percentile(xhat, 75)
+plt.plot([0,len(df[target])],[value1,value1],color="purple")
+#plt.plot([0,len(xhat)],[value2,value2])
+plt.show()
\ No newline at end of file
diff --git a/process.py b/process.py
new file mode 100644
index 0000000..8c52f1b
--- /dev/null
+++ b/process.py
@@ -0,0 +1,86 @@
+import numpy as np
+import cv2
+import math
+import sys
+
+# Init
+target = sys.argv[1]
+cap = cv2.VideoCapture("data/{}.mp4".format(target))
+cap.set(cv2.CAP_PROP_FPS,240)
+out = open("{}.tsv".format(target),"w+")
+out.write("Time\tX\tY\tCount\tVelocity\n")
+
+# Image Processing
+scale = 16.0
+diff_thresh = 50
+blur_kernel = (7,7)
+
+# Background
+bg_alpha = 0.99
+bg = None
+bg_float = None
+
+# Position
+pos_alpha = 0.99
+posx = 0.0
+posy = 0.0
+
+# Count
+running_count = 0.0
+
+# Main Loop
+frame_number = 0
+
+while True:
+    # Grab Frame
+    ret, src = cap.read()
+    if not ret:
+        break
+
+    # Ensmallen and grayen
+    blur = cv2.GaussianBlur(src, blur_kernel,0)
+    smol = cv2.resize(blur, (int(src.shape[1]/scale), int(src.shape[0]/scale)))
+    gray = cv2.cvtColor(smol, cv2.COLOR_BGR2GRAY)
+    if bg is None:
+        bg = gray
+        bg_float = np.zeros(gray.shape,dtype=np.float32)
+
+    # Get Difference
+    diff = cv2.absdiff(gray, bg)
+    retval, thresh = cv2.threshold(diff, diff_thresh, 255, cv2.THRESH_TOZERO)
+
+    # Normalize Count
+    count = np.sum(thresh)/(smol.shape[0]*smol.shape[1]*255)
+    
+    # Process Count
+    if count > 0.0:
+        moments = cv2.moments(thresh)
+        cX = (moments["m10"] / moments["m00"])/smol.shape[1]
+        cY = (moments["m01"] / moments["m00"])/smol.shape[0]
+        prevx = posx
+        prevy = posy
+        posx = posx * pos_alpha + cX * (1.0-pos_alpha)
+        posy = posy * pos_alpha + cY * (1.0-pos_alpha)
+        velocity = math.sqrt((prevx-posx) * (prevx-posx) + (prevy - posy) * (prevy - posy))
+        running_count = running_count * pos_alpha + count * (1.0 - pos_alpha)
+        out.write("{}\t{}\t{}\t{}\t{}\n".format(frame_number/30.0,posx,posy,running_count,velocity))
+
+    # Calculate new BG
+    bg_float = bg_float * bg_alpha + gray * (1.0 - bg_alpha)
+    bg = bg_float.astype(np.uint8)
+
+    # Draw
+    #cv2.circle(smol, (int(posx*smol.shape[1]), int(posy*smol.shape[0])), 3, (255,0,0),6)
+
+    # Show Results
+    # cv2.imshow("thresh", cv2.resize(thresh, (int(src.shape[1]/2.0), int(src.shape[0]/2.0))))
+    # cv2.imshow("smol", cv2.resize(smol, (int(src.shape[1]/2.0), int(src.shape[0]/2.0))))
+    # key = cv2.waitKey(1)
+    # if key == 27:
+    #     break
+
+    frame_number += 1
+    print(frame_number)
+    
+cap.release()
+cv2.destroyAllWindows()
\ No newline at end of file